The EM algorithm In the previous set of notes, we talked about the EM algorithm as applied to tting a mixture of Gaussians. We begin our discussion with a Each step is a bit opaque, but the three combined provide a startlingly intuitive understanding. Maximum likelihood estimation is ubiquitous in statistics 2. The EM algorithm In the previous set of notes, we talked about the EM algorithm as applied to ﬁtting a mixture of Gaussians. In ML estimation, we wish to estimate the model parameter(s) for which the observed data are the most likely. In this set of notes, we give a broader view of the EM algorithm, and show how it can be applied to a large family of estimation problems with latent variables. –Eg: Hidden Markov, Bayesian Belief Networks The EM algorithm is not a single algorithm, but a framework for the design of iterative likelihood maximization methods for parameter estimation. The algorithm is an iterative algorithm that starts from some initial estimate of Θ (e.g., random), and then proceeds to … The surrogate function is created by calculating a certain conditional expectation. The ﬁrst proper theoretical study of the algorithm was done by Dempster, Laird, and Rubin (1977). This algorithm can be used with any off-the-shelf logistic model. “Full EM” is a bit more involved, but this is the crux. 2. Coordinate ascent is widely used in numerical optimization. 3. THE EM ALGORITHM FOR MIXTURES The EM algorithm (Dempster et al., 1977) is a powerful algorithm for ML esti- Chapter14 TheExpectation-Maximisation Algorithm 14.1 TheEMalgorithm-amethodformaximisingthelikeli-hood Let us suppose that we observeY = {Yi}n i=1.The joint density ofY isf(Y;θ0), andθ0 is an unknownparameter. The EM-algorithm The EM-algorithm (Expectation-Maximization algorithm) is an iterative proce-dure for computing the maximum likelihood estimator when only a subset of the data is available. Motivation and EM View 2. M-step: Compute EM Derivation (ctd) Jensen’s Inequality: equality holds when is an affine function. E-step: Compute 2. 3 EM Applications in the Mixture Models 3.1 Mixture of Bernoulli Revised View em-algorithm.pdf from CSC 575 at North Carolina State University. Also see Dempster, Laird and Rubin (1977) and Wu (1983). The exposition will assume that the latent variables are continuous, but an analogue derivation for discrete zcan be obtained by substituting integrals EM Algorithm in General We shall give some hints on why the algorithm introduced heuristically in the preceding section does maximize the log likelihood function. EM algorithm is an iteration algorithm containing two steps for each iteration, called E step and M step. The EM Algorithm for Gaussian Mixture Models We deﬁne the EM (Expectation-Maximization) algorithm for Gaussian mixtures as follows. The EM algorithm and its properties Reading: Schafer (1997), Section 3.2 and 3.3. Consider a general situation in which the observed data Xis augmented by some hidden variables Zto form the \complete" data, where Zcan be either real missing data or Solution. Extensions to other discrete distributions that can be seen as arising by mixtures are described in section 7. Rather than picking the single most likely completion of the missing coin assignments on each iteration, the expectation maximization algorithm computes probabilities for each possible completion of the missing data, using the current parameters θˆ(t). •EM-algorithm to simultaneously optimize state estimates and model parameters •Given ``training data’’, EM-algorithm can be used (off-line) to learn the model for subsequent use in (real-time) Kalman filters 3 The Expectation-Maximization Algorithm The EM algorithm is an eﬃcient iterative procedure to compute the Maximum Likelihood (ML) estimate in the presence of missing or hidden data. The Overview of EM Algorithm 3. 2. Intro: Expectation Maximization Algorithm •EM algorithm provides a general approach to learning in presence of unobserved variables. The expectation maximization algorithm is a refinement on this basic idea. x 1 x 2 network community detection Campbell et al Social Network Analysis image segmentation vector quantisation genetic clustering anomaly detection crime analysis. It is usually also the case that these models are EM Algorithm: Iterate 1. However, calculating the conditional expectation required in the E-step of the algorithm may be infeasible, especially when this expectation is a large sum or a high-dimensional integral. In each iteration, the EM algorithm ﬁrst calculates the conditional distribution of the missing data based on parameters from the previous an EM algorithm to estimate the underlying presence-absence logistic model for presence-only data. This is achieved for M-step optimization can be done efficiently in most cases E-step is usually the more expensive step The EM algorithm is iterative and converges to a local maximum. The EM Algorithm Machine Learning Machine Learning The EM Algorithm Coins with Missing Data I … 1. There are various of lower bound Dismiss Join GitHub today. algorithm ﬁrst can proceed directly to section 14.3. EM-algorithm Max Welling California Institute of Technology 136-93 Pasadena, CA 91125 welling@vision.caltech.edu 1 Introduction In the previous class we already mentioned that many of the most powerful probabilistic models contain hidden variables. another one. Contribute to jojonki/EM-Algorithm development by creating an account on GitHub. Bayesian networks: EM algorithm • In this module, I’ll introduce the EM algorithm for learning Bayesian networks when we It is useful when some of the random variables involved are not observed, i.e., considered missing or incomplete. Recall that a Gaussian mixture is deﬁned as f(y i|θ) = Xk i=1 π N(y |µi,Σ ), (4) where θ def= {(π iµiΣi)} k i=1 is the parameter, with Pk i=1 πi = 1. 2 EM as Lower Bound Maximization EM can be derived in many different ways, one of the most insightful being in terms of lower bound maximization (Neal and Hinton, 1998; Minka, 1998), as illustrated with the example from Section 1. The EM Algorithm The EM algorithm is a general method for nding maximum likelihood estimates of the parameters of an underlying distribution from the observed data when the data is "incomplete" or has "missing values" The "E" stands for "Expectation" The "M" stands for "Maximization" To set up the EM algorithm successfully, one has to come up Throughout, q(z) will be used to denote an arbitrary distribution of the latent variables, z. What is clustering? EM Algorithm EM algorithm provides a systematic approach to ﬁnding ML estimates in cases where our model can be formulated in terms of “observed” and “unobserved” (missing) data. First, start with an initial (0). In this set of notes, we give a broader view of the EM algorithm, and show how it can be applied to a large family of estimation problems with latent variables. The first unified account of the theory, methodology, and applications of the EM algorithm and its extensionsSince its inception in 1977, the Expectation-Maximization (EM) algorithm has been the subject of intense scrutiny, dozens of applications, numerous extensions, and thousands of publications. Basic Idea ♦To associate with the given incomplete-data problem,acomplete-data problem for which ML estimation is computationally more tractable! EM algorithm: Applications — 8/35 — Expectation-Mmaximization algorithm (Dempster, Laird, & Rubin, 1977, JRSSB, 39:1–38) is a general iterative algorithm for parameter estimation by maximum likelihood (optimization problems). Any algorithm based on the EM framework we refer to as an “EM algorithm”. Recall that we have the following: b MLE = argmax 2 P(Y obsj ) = argmax 2 Z P(Y obs;Y missj )dY miss De nition 1 (EM Algorithm). 14.2.1 Why the EM algorithm works The relation of the EM algorithm to the log-likelihood function can be explained in three steps. It is often used in situations that are not exponential families, but are derived from exponential families. The following gure illustrates the process of EM algorithm. EM is a special case of the MM algorithm that relies on the notion of missing information. GitHub is home to over 50 million developers working together to host and review code, manage projects, and build software together. •In many practical learning settings, only a subset of relevant features or variables might be observable. The EM algorithm is extensively used A Standard Tool in the Statistical Repertoire! Examples 4. Clustering and the EM algorithm Rich Turner and Jos´e Miguel Hern ´andez-Lobato x 1 x 2. A Monte Carlo EM algorithm is described in section 6. EM algorithm is usually referred as a typical example of coordinate ascent, where in each E/M step, we have one variable ﬁxed ( old in E step and q(Z) in M step), and maximize w.r.t. Overview of the EM Algorithm 1. With enough data, this comes arbitrarily close to any (reasonable) probability density, but it does have some drawbacks. Variants of EM Algorithm EM Algorithm (1)! In this section, we derive the EM algorithm … What is clustering? The black curve is log-likelihood l( ) and the red curve is the corresponding lower bound. 2. The EM Algorithm Introduction The EM algorithm is a very general iterative algorithm for parameter estimation by maximum likelihood when some of the random variables involved are not observed i.e., con-sidered missing or incomplete. For the (t+1)th iteration: Theoretical Issues in EM Algorithm 5. cal Expectation-Maximization (EM) algorithm (Dempster, Laird and Rubin (1977)), which is widely used for computing maximum likelihood estimates (MLEs) for miss-ing data or latent variables. We begin our discussion with a Here, “missing data” refers to quantities that, if we could measure them, … Mixture Models, Latent Variables and the EM Algorithm 36-350, Data Mining, Fall 2009 30 November 2009 Contents ... true distribution by sticking a small copy of a kernel pdf at each observed data point and adding them up. View EM Algorithm.pdf from CS F212 at BITS Pilani Goa. For models with stepwise ﬁtting procedures, such as boosted trees, the ﬁtting process can be accelerated by interleaving expectation. 1 The EM algorithm In this set of notes, we discuss the EM (Expectation-Maximization) algorithm, which is a common algorithm used in statistical estimation to try and nd the MLE. Our goal is to derive the EM algorithm for learning θ. Concluding remarks can be found in section 8. The EM algorithm is a much used tool for maximum likelihood estimation in missing or incomplete data problems. “Classiﬁcation EM” If z ij < .5, pretend it’s 0; z ij > .5, pretend it’s 1 I.e., classify points as component 0 or 1 Now recalc θ, assuming that partition Then recalc z ij, assuming that θ Then re-recalc θ, assuming new z ij, etc., etc. We will denote these variables with y. 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